Implementation of images in Zarr files.
Project Links
Meta
Author: The Open Microscopy Team
Requires Python: >3.10
Classifiers
Development Status
- 4 - Beta
Intended Audience
- Developers
- Science/Research
Topic
- Software Development :: Libraries :: Python Modules
Programming Language
- Python
- Python :: 3
Operating System
- OS Independent
ome-zarr-py
Tools for multi-resolution images stored in Zarr filesets, according to the OME NGFF spec.
See Documentation for usage information.
Documentation
Documentation will be automatically built with readthedocs.
It can be built locally with:
$ pip install -r docs/requirements.txt $ sphinx-build -b html docs/source/ docs/build/html
Tests
Tests can be run locally via tox with:
$ pip install tox $ tox
To enable pre-commit code validation:
$ pip install pre-commit $ pre-commit install
Release process
This repository uses setuptools_scm to manage version numbers.
Go to https://github.com/ome/ome-zarr-py/releases and click on Draft a new release.
Under Choose a tag, type the new version number (e.g. 0.1.0) and choose Create a new tag on publish from the dropdown.
Click on Generate release notes to create a changelog and Publish release to publish the release.
License
Distributed under the terms of the BSD license, “ome-zarr-py” is free and open source software
0.12.2
Aug 22, 2025
0.12.1
Aug 21, 2025
0.12.0
Aug 18, 2025
0.12rc1
Aug 07, 2025
0.11.1
Apr 23, 2025
0.10.3
Jan 08, 2025
0.10.2
Dec 18, 2024
0.9.0
May 22, 2024
0.8.3
Nov 14, 2023
0.8.2
Sep 29, 2023
0.8.1
Sep 15, 2023
0.8.0
Jul 05, 2023
0.7.1
May 08, 2023
0.7.0
May 04, 2023
0.6.1
Oct 26, 2022
0.6.0
Sep 09, 2022
0.5.2
Jul 11, 2022
0.5.1
Jul 01, 2022
0.5.0
Jun 20, 2022
0.4.2
May 24, 2022
0.4.1
Apr 05, 2022
0.4.0
Mar 28, 2022
0.3.1
Mar 16, 2022
0.3.0
Feb 24, 2022
0.3a2
Feb 07, 2022
0.3a1
Jan 19, 2022
0.2.1
Nov 08, 2021
0.2.0
Oct 12, 2021
0.1.1
Sep 19, 2021
0.1.0
Sep 09, 2021
0.0.23
Aug 27, 2021
0.0.22
Aug 25, 2021
0.0.21
Aug 14, 2021
0.0.20
Jun 14, 2021
0.0.19
May 13, 2021
0.0.18
Apr 24, 2021
0.0.17
Dec 07, 2020
0.0.16
Nov 30, 2020
0.0.15
Oct 21, 2020
0.0.14
Sep 18, 2020
0.0.13
Sep 16, 2020
0.0.12
Aug 14, 2020
0.0.11
Aug 11, 2020
0.0.10
Aug 03, 2020
0.0.9.dev0
Jul 29, 2020
0.0.8
Jun 14, 2020
0.0.7
May 17, 2020
0.0.6
May 12, 2020
0.0.5
May 11, 2020
0.0.4
May 11, 2020
0.0.3
May 08, 2020
0.0.2
May 07, 2020
0.0.1
May 06, 2020
Wheel compatibility matrix
Files in release
Extras:
Dependencies:
numpy
dask
zarr
(>=v3.0.0)
fsspec[s3]
(!=2021.07.0,!=2023.9.0,>=0.8)
aiohttp
requests
scikit-image
(>=0.19.0)
toolz